Gene : evm_27.TU.AmTr_v1.0_scaffold00131.19 A. trichopoda v1.0
Defline:  (1 of 3) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  19
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00131.19 Secondary Identifier:  ? PAC:31567786
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYOXYLATE-BYPASS Amborella trichopoda pathologic  
Atrichopoda PWY-5464 Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  
Atrichopoda PWY-5690 Amborella trichopoda pathologic  
Atrichopoda PWY-6549 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00131.19 0.5kb upstream 0.5kb upstream 17238 true AmTr_v1.0_scaffold00131: 269146-286383 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00131: 285884-286383 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 0.5kb downstream 0.5kb downstream 17238 true AmTr_v1.0_scaffold00131: 268646-285883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00131: 268646-269145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 1.0kb upstream 1.0kb upstream 17738 true AmTr_v1.0_scaffold00131: 269146-286883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00131: 285884-286883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 1.0kb downstream 1.0kb downstream 17738 true AmTr_v1.0_scaffold00131: 268146-285883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00131: 268146-269145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 2.0kb upstream 2.0kb upstream 18738 true AmTr_v1.0_scaffold00131: 269146-287883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00131: 285884-287883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 2.0kb downstream 2.0kb downstream 18738 true AmTr_v1.0_scaffold00131: 267146-285883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00131: 267146-269145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 5.0kb upstream 5.0kb upstream 21738 true AmTr_v1.0_scaffold00131: 269146-290883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00131: 285884-290883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 5.0kb downstream 5.0kb downstream 21738 true AmTr_v1.0_scaffold00131: 264146-285883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00131: 264146-269145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 10.0kb upstream 10.0kb upstream 26738 true AmTr_v1.0_scaffold00131: 269146-295883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00131: 285884-295883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 10.0kb downstream 10.0kb downstream 26738 true AmTr_v1.0_scaffold00131: 259146-285883 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.19 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00131: 259146-269145 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041314 5273 Angiosperm View MSA
121345226 5274 Embryophyte View MSA
123424186 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain