Gene : evm_27.TU.AmTr_v1.0_scaffold00130.69 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11403 - CYTOCHROME C OXIDASE SUBUNIT III Genomic Order:  69
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00130.69 Secondary Identifier:  ? PAC:31553325
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-7279 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00130.69 0.5kb upstream 0.5kb upstream 1103 true AmTr_v1.0_scaffold00130: 1566635-1567737 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00130: 1567238-1567737 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 0.5kb downstream 0.5kb downstream 1103 true AmTr_v1.0_scaffold00130: 1566135-1567237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00130: 1566135-1566634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 1.0kb upstream 1.0kb upstream 1603 true AmTr_v1.0_scaffold00130: 1566635-1568237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00130: 1567238-1568237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 1.0kb downstream 1.0kb downstream 1603 true AmTr_v1.0_scaffold00130: 1565635-1567237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00130: 1565635-1566634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 2.0kb upstream 2.0kb upstream 2603 true AmTr_v1.0_scaffold00130: 1566635-1569237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00130: 1567238-1569237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 2.0kb downstream 2.0kb downstream 2603 true AmTr_v1.0_scaffold00130: 1564635-1567237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00130: 1564635-1566634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 5.0kb upstream 5.0kb upstream 5603 true AmTr_v1.0_scaffold00130: 1566635-1572237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00130: 1567238-1572237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 5.0kb downstream 5.0kb downstream 5603 true AmTr_v1.0_scaffold00130: 1561635-1567237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00130: 1561635-1566634 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 10.0kb upstream 10.0kb upstream 10603 true AmTr_v1.0_scaffold00130: 1566635-1577237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00130: 1567238-1577237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 10.0kb downstream 10.0kb downstream 10603 true AmTr_v1.0_scaffold00130: 1556635-1567237 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.69 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00130: 1556635-1566634 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050963 5273 Angiosperm View MSA
121348326 5274 Embryophyte View MSA
123426097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain