Gene : evm_27.TU.AmTr_v1.0_scaffold00128.18 A. trichopoda v1.0
Defline:  (1 of 2) 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase Genomic Order:  18
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00128.18 Secondary Identifier:  ? PAC:31561391
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5129 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00128.18 0.5kb upstream 0.5kb upstream 1548 true AmTr_v1.0_scaffold00128: 883277-884824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00128: 884325-884824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 0.5kb downstream 0.5kb downstream 1548 true AmTr_v1.0_scaffold00128: 882777-884324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00128: 882777-883276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 1.0kb upstream 1.0kb upstream 2048 true AmTr_v1.0_scaffold00128: 883277-885324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00128: 884325-885324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 1.0kb downstream 1.0kb downstream 2048 true AmTr_v1.0_scaffold00128: 882277-884324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00128: 882277-883276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 2.0kb upstream 2.0kb upstream 3048 true AmTr_v1.0_scaffold00128: 883277-886324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00128: 884325-886324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 2.0kb downstream 2.0kb downstream 3048 true AmTr_v1.0_scaffold00128: 881277-884324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00128: 881277-883276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 5.0kb upstream 5.0kb upstream 6048 true AmTr_v1.0_scaffold00128: 883277-889324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00128: 884325-889324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 5.0kb downstream 5.0kb downstream 6048 true AmTr_v1.0_scaffold00128: 878277-884324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00128: 878277-883276 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 10.0kb upstream 10.0kb upstream 11048 true AmTr_v1.0_scaffold00128: 883277-894324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00128: 884325-894324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 10.0kb downstream 10.0kb downstream 11048 true AmTr_v1.0_scaffold00128: 873277-884324 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00128.18 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00128: 873277-883276 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain