Gene : evm_27.TU.AmTr_v1.0_scaffold00122.71 A. trichopoda v1.0
Defline:  (1 of 1) PTHR33427:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Genomic Order:  69
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00122.71 Secondary Identifier:  ? PAC:31571861
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00122.71 0.5kb upstream 0.5kb upstream 4336 true AmTr_v1.0_scaffold00122: 1864150-1868485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00122: 1864150-1864649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 0.5kb downstream 0.5kb downstream 4336 true AmTr_v1.0_scaffold00122: 1864650-1868985 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00122: 1868486-1868985 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 1.0kb upstream 1.0kb upstream 4836 true AmTr_v1.0_scaffold00122: 1863650-1868485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00122: 1863650-1864649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 1.0kb downstream 1.0kb downstream 4836 true AmTr_v1.0_scaffold00122: 1864650-1869485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00122: 1868486-1869485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 2.0kb upstream 2.0kb upstream 5836 true AmTr_v1.0_scaffold00122: 1862650-1868485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00122: 1862650-1864649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 2.0kb downstream 2.0kb downstream 5836 true AmTr_v1.0_scaffold00122: 1864650-1870485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00122: 1868486-1870485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 5.0kb upstream 5.0kb upstream 8836 true AmTr_v1.0_scaffold00122: 1859650-1868485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00122: 1859650-1864649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 5.0kb downstream 5.0kb downstream 8836 true AmTr_v1.0_scaffold00122: 1864650-1873485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00122: 1868486-1873485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 10.0kb upstream 10.0kb upstream 13836 true AmTr_v1.0_scaffold00122: 1854650-1868485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00122: 1854650-1864649 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 10.0kb downstream 10.0kb downstream 13836 true AmTr_v1.0_scaffold00122: 1864650-1878485 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00122.71 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00122: 1868486-1878485 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain