Gene : evm_27.TU.AmTr_v1.0_scaffold00126.1 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11851:SF68 - PRESEQUENCE PROTEASE 1, CHLOROPLASTIC/MITOCHONDRIAL-RELATED Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00126.1 Secondary Identifier:  ? PAC:31551953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00126.1 0.5kb upstream 0.5kb upstream 32990 true AmTr_v1.0_scaffold00126: 19683-52672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00126: 19683-20182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 0.5kb downstream 0.5kb downstream 32990 true AmTr_v1.0_scaffold00126: 20183-53172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00126: 52673-53172 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 1.0kb upstream 1.0kb upstream 33490 true AmTr_v1.0_scaffold00126: 19183-52672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00126: 19183-20182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 1.0kb downstream 1.0kb downstream 33490 true AmTr_v1.0_scaffold00126: 20183-53672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00126: 52673-53672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 2.0kb upstream 2.0kb upstream 34490 true AmTr_v1.0_scaffold00126: 18183-52672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00126: 18183-20182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 2.0kb downstream 2.0kb downstream 34490 true AmTr_v1.0_scaffold00126: 20183-54672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00126: 52673-54672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 5.0kb upstream 5.0kb upstream 37490 true AmTr_v1.0_scaffold00126: 15183-52672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00126: 15183-20182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 5.0kb downstream 5.0kb downstream 37490 true AmTr_v1.0_scaffold00126: 20183-57672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00126: 52673-57672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 10.0kb upstream 10.0kb upstream 42490 true AmTr_v1.0_scaffold00126: 10183-52672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00126: 10183-20182 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 10.0kb downstream 10.0kb downstream 42490 true AmTr_v1.0_scaffold00126: 20183-62672 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00126.1 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00126: 52673-62672 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042751 5273 Angiosperm View MSA
121343874 5274 Embryophyte View MSA
123424762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain