Gene : evm_27.TU.AmTr_v1.0_scaffold00145.35 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  35
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00145.35 Secondary Identifier:  ? PAC:31552731
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5097 Amborella trichopoda pathologic  
Atrichopoda PWY-724 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00145.35 0.5kb upstream 0.5kb upstream 31919 true AmTr_v1.0_scaffold00145: 1056308-1088226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00145: 1056308-1056807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 0.5kb downstream 0.5kb downstream 31919 true AmTr_v1.0_scaffold00145: 1056808-1088726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00145: 1088227-1088726 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 1.0kb upstream 1.0kb upstream 32419 true AmTr_v1.0_scaffold00145: 1055808-1088226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00145: 1055808-1056807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 1.0kb downstream 1.0kb downstream 32419 true AmTr_v1.0_scaffold00145: 1056808-1089226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00145: 1088227-1089226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 2.0kb upstream 2.0kb upstream 33419 true AmTr_v1.0_scaffold00145: 1054808-1088226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00145: 1054808-1056807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 2.0kb downstream 2.0kb downstream 33419 true AmTr_v1.0_scaffold00145: 1056808-1090226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00145: 1088227-1090226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 5.0kb upstream 5.0kb upstream 36419 true AmTr_v1.0_scaffold00145: 1051808-1088226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00145: 1051808-1056807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 5.0kb downstream 5.0kb downstream 36419 true AmTr_v1.0_scaffold00145: 1056808-1093226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00145: 1088227-1093226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 10.0kb upstream 10.0kb upstream 41419 true AmTr_v1.0_scaffold00145: 1046808-1088226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00145: 1046808-1056807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 10.0kb downstream 10.0kb downstream 41419 true AmTr_v1.0_scaffold00145: 1056808-1098226 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.35 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00145: 1088227-1098226 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain