Gene : evm_27.TU.AmTr_v1.0_scaffold00145.33 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11035 - PTPLA DOMAIN PROTEIN Genomic Order:  33
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00145.33 Secondary Identifier:  ? PAC:31552745
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5080 Amborella trichopoda pathologic  
Atrichopoda PWY-6433 Amborella trichopoda pathologic  
Atrichopoda PWY-6598 Amborella trichopoda pathologic  
Atrichopoda PWY-7036 Amborella trichopoda pathologic  
Atrichopoda PWY-7601 Amborella trichopoda pathologic  
Atrichopoda PWY-7606 Amborella trichopoda pathologic  
Atrichopoda PWY-7619 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00145.33 0.5kb upstream 0.5kb upstream 8313 true AmTr_v1.0_scaffold00145: 1032069-1040381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00145: 1039882-1040381 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 0.5kb downstream 0.5kb downstream 8313 true AmTr_v1.0_scaffold00145: 1031569-1039881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00145: 1031569-1032068 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 1.0kb upstream 1.0kb upstream 8813 true AmTr_v1.0_scaffold00145: 1032069-1040881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00145: 1039882-1040881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 1.0kb downstream 1.0kb downstream 8813 true AmTr_v1.0_scaffold00145: 1031069-1039881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00145: 1031069-1032068 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 2.0kb upstream 2.0kb upstream 9813 true AmTr_v1.0_scaffold00145: 1032069-1041881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00145: 1039882-1041881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 2.0kb downstream 2.0kb downstream 9813 true AmTr_v1.0_scaffold00145: 1030069-1039881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00145: 1030069-1032068 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 5.0kb upstream 5.0kb upstream 12813 true AmTr_v1.0_scaffold00145: 1032069-1044881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00145: 1039882-1044881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 5.0kb downstream 5.0kb downstream 12813 true AmTr_v1.0_scaffold00145: 1027069-1039881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00145: 1027069-1032068 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 10.0kb upstream 10.0kb upstream 17813 true AmTr_v1.0_scaffold00145: 1032069-1049881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00145: 1039882-1049881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 10.0kb downstream 10.0kb downstream 17813 true AmTr_v1.0_scaffold00145: 1022069-1039881 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00145.33 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00145: 1022069-1032068 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043901 5273 Angiosperm View MSA
121347400 5274 Embryophyte View MSA
123425989 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain