Gene : evm_27.TU.AmTr_v1.0_scaffold00142.63 A. trichopoda v1.0
Defline:  (1 of 1) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  61
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00142.63 Secondary Identifier:  ? PAC:31555729
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00142.63 0.5kb upstream 0.5kb upstream 19813 true AmTr_v1.0_scaffold00142: 1157566-1177378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00142: 1176879-1177378 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 0.5kb downstream 0.5kb downstream 19813 true AmTr_v1.0_scaffold00142: 1157066-1176878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00142: 1157066-1157565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 1.0kb upstream 1.0kb upstream 20313 true AmTr_v1.0_scaffold00142: 1157566-1177878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00142: 1176879-1177878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 1.0kb downstream 1.0kb downstream 20313 true AmTr_v1.0_scaffold00142: 1156566-1176878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00142: 1156566-1157565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 2.0kb upstream 2.0kb upstream 21313 true AmTr_v1.0_scaffold00142: 1157566-1178878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00142: 1176879-1178878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 2.0kb downstream 2.0kb downstream 21313 true AmTr_v1.0_scaffold00142: 1155566-1176878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00142: 1155566-1157565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 5.0kb upstream 5.0kb upstream 24313 true AmTr_v1.0_scaffold00142: 1157566-1181878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00142: 1176879-1181878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 5.0kb downstream 5.0kb downstream 24313 true AmTr_v1.0_scaffold00142: 1152566-1176878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00142: 1152566-1157565 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 10.0kb upstream 10.0kb upstream 29313 true AmTr_v1.0_scaffold00142: 1157566-1186878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00142: 1176879-1186878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 10.0kb downstream 10.0kb downstream 29313 true AmTr_v1.0_scaffold00142: 1147566-1176878 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00142.63 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00142: 1147566-1157565 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain