Gene : evm_27.TU.AmTr_v1.0_scaffold00143.4 A. trichopoda v1.0
Defline:  (1 of 1) PF16669 - Tetratricopeptide repeat protein 5 OB fold domain (TTC5_OB) Genomic Order:  4
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00143.4 Secondary Identifier:  ? PAC:31564218
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00143.4 0.5kb upstream 0.5kb upstream 29424 true AmTr_v1.0_scaffold00143: 191397-220820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00143: 191397-191896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 0.5kb downstream 0.5kb downstream 29424 true AmTr_v1.0_scaffold00143: 191897-221320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00143: 220821-221320 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 1.0kb upstream 1.0kb upstream 29924 true AmTr_v1.0_scaffold00143: 190897-220820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00143: 190897-191896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 1.0kb downstream 1.0kb downstream 29924 true AmTr_v1.0_scaffold00143: 191897-221820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00143: 220821-221820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 2.0kb upstream 2.0kb upstream 30924 true AmTr_v1.0_scaffold00143: 189897-220820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00143: 189897-191896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 2.0kb downstream 2.0kb downstream 30924 true AmTr_v1.0_scaffold00143: 191897-222820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00143: 220821-222820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 5.0kb upstream 5.0kb upstream 33924 true AmTr_v1.0_scaffold00143: 186897-220820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00143: 186897-191896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 5.0kb downstream 5.0kb downstream 33924 true AmTr_v1.0_scaffold00143: 191897-225820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00143: 220821-225820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 10.0kb upstream 10.0kb upstream 38924 true AmTr_v1.0_scaffold00143: 181897-220820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00143: 181897-191896 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 10.0kb downstream 10.0kb downstream 38924 true AmTr_v1.0_scaffold00143: 191897-230820 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00143.4 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00143: 220821-230820 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048209 5273 Angiosperm View MSA
121349212 5274 Embryophyte View MSA
123425821 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain