Gene : evm_27.TU.AmTr_v1.0_scaffold00141.7 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11712//PTHR11712:SF286 - POLYKETIDE SYNTHASE-RELATED Genomic Order:  7
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00141.7 Secondary Identifier:  ? PAC:31557025
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda FASYN-ELONG-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5156 Amborella trichopoda pathologic  
Atrichopoda PWY-5971 Amborella trichopoda pathologic  
Atrichopoda PWY-5989 Amborella trichopoda pathologic  
Atrichopoda PWY-6282 Amborella trichopoda pathologic  
Atrichopoda PWY-7388 Amborella trichopoda pathologic  
Atrichopoda PWY-7663 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00141.7 0.5kb upstream 0.5kb upstream 23710 true AmTr_v1.0_scaffold00141: 199271-222980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00141: 199271-199770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 0.5kb downstream 0.5kb downstream 23710 true AmTr_v1.0_scaffold00141: 199771-223480 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00141: 222981-223480 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 1.0kb upstream 1.0kb upstream 24210 true AmTr_v1.0_scaffold00141: 198771-222980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00141: 198771-199770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 1.0kb downstream 1.0kb downstream 24210 true AmTr_v1.0_scaffold00141: 199771-223980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00141: 222981-223980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 2.0kb upstream 2.0kb upstream 25210 true AmTr_v1.0_scaffold00141: 197771-222980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00141: 197771-199770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 2.0kb downstream 2.0kb downstream 25210 true AmTr_v1.0_scaffold00141: 199771-224980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00141: 222981-224980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 5.0kb upstream 5.0kb upstream 28210 true AmTr_v1.0_scaffold00141: 194771-222980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00141: 194771-199770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 5.0kb downstream 5.0kb downstream 28210 true AmTr_v1.0_scaffold00141: 199771-227980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00141: 222981-227980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 10.0kb upstream 10.0kb upstream 33210 true AmTr_v1.0_scaffold00141: 189771-222980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00141: 189771-199770 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 10.0kb downstream 10.0kb downstream 33210 true AmTr_v1.0_scaffold00141: 199771-232980 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00141.7 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00141: 222981-232980 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain