Gene : evm_27.TU.AmTr_v1.0_scaffold00140.32 A. trichopoda v1.0
Defline:  (1 of 4) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  32
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00140.32 Secondary Identifier:  ? PAC:31569219
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6927 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00140.32 0.5kb upstream 0.5kb upstream 27580 true AmTr_v1.0_scaffold00140: 807447-835026 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00140: 834527-835026 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 0.5kb downstream 0.5kb downstream 27580 true AmTr_v1.0_scaffold00140: 806947-834526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00140: 806947-807446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 1.0kb upstream 1.0kb upstream 28080 true AmTr_v1.0_scaffold00140: 807447-835526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00140: 834527-835526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 1.0kb downstream 1.0kb downstream 28080 true AmTr_v1.0_scaffold00140: 806447-834526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00140: 806447-807446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 2.0kb upstream 2.0kb upstream 29080 true AmTr_v1.0_scaffold00140: 807447-836526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00140: 834527-836526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 2.0kb downstream 2.0kb downstream 29080 true AmTr_v1.0_scaffold00140: 805447-834526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00140: 805447-807446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 5.0kb upstream 5.0kb upstream 32080 true AmTr_v1.0_scaffold00140: 807447-839526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00140: 834527-839526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 5.0kb downstream 5.0kb downstream 32080 true AmTr_v1.0_scaffold00140: 802447-834526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00140: 802447-807446 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 10.0kb upstream 10.0kb upstream 37080 true AmTr_v1.0_scaffold00140: 807447-844526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00140: 834527-844526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 10.0kb downstream 10.0kb downstream 37080 true AmTr_v1.0_scaffold00140: 797447-834526 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00140.32 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00140: 797447-807446 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042360 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121346632 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain