Gene : evm_27.TU.AmTr_v1.0_scaffold00138.16 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13317:SF4 - TRANSMEMBRANE ANTERIOR POSTERIOR TRANSFORMATION PROTEIN 1 HOMOLOG Genomic Order:  16
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00138.16 Secondary Identifier:  ? PAC:31552638
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00138.16 0.5kb upstream 0.5kb upstream 22180 true AmTr_v1.0_scaffold00138: 326427-348606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00138: 348107-348606 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 0.5kb downstream 0.5kb downstream 22180 true AmTr_v1.0_scaffold00138: 325927-348106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00138: 325927-326426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 1.0kb upstream 1.0kb upstream 22680 true AmTr_v1.0_scaffold00138: 326427-349106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00138: 348107-349106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 1.0kb downstream 1.0kb downstream 22680 true AmTr_v1.0_scaffold00138: 325427-348106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00138: 325427-326426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 2.0kb upstream 2.0kb upstream 23680 true AmTr_v1.0_scaffold00138: 326427-350106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00138: 348107-350106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 2.0kb downstream 2.0kb downstream 23680 true AmTr_v1.0_scaffold00138: 324427-348106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00138: 324427-326426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 5.0kb upstream 5.0kb upstream 26680 true AmTr_v1.0_scaffold00138: 326427-353106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00138: 348107-353106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 5.0kb downstream 5.0kb downstream 26680 true AmTr_v1.0_scaffold00138: 321427-348106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00138: 321427-326426 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 10.0kb upstream 10.0kb upstream 31680 true AmTr_v1.0_scaffold00138: 326427-358106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00138: 348107-358106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 10.0kb downstream 10.0kb downstream 31680 true AmTr_v1.0_scaffold00138: 316427-348106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00138.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00138: 316427-326426 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042110 5273 Angiosperm View MSA
121347997 5274 Embryophyte View MSA
123426226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain