Gene : evm_27.TU.AmTr_v1.0_scaffold00154.42 A. trichopoda v1.0
Defline:  (1 of 26) PF03169 - OPT oligopeptide transporter protein (OPT) Genomic Order:  41
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00154.42 Secondary Identifier:  ? PAC:31549372
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00154.42 0.5kb upstream 0.5kb upstream 1106 true AmTr_v1.0_scaffold00154: 662814-663919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00154: 662814-663313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 0.5kb downstream 0.5kb downstream 1106 true AmTr_v1.0_scaffold00154: 663314-664419 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00154: 663920-664419 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 1.0kb upstream 1.0kb upstream 1606 true AmTr_v1.0_scaffold00154: 662314-663919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00154: 662314-663313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 1.0kb downstream 1.0kb downstream 1606 true AmTr_v1.0_scaffold00154: 663314-664919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00154: 663920-664919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 2.0kb upstream 2.0kb upstream 2606 true AmTr_v1.0_scaffold00154: 661314-663919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00154: 661314-663313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 2.0kb downstream 2.0kb downstream 2606 true AmTr_v1.0_scaffold00154: 663314-665919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00154: 663920-665919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 5.0kb upstream 5.0kb upstream 5606 true AmTr_v1.0_scaffold00154: 658314-663919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00154: 658314-663313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 5.0kb downstream 5.0kb downstream 5606 true AmTr_v1.0_scaffold00154: 663314-668919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00154: 663920-668919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 10.0kb upstream 10.0kb upstream 10606 true AmTr_v1.0_scaffold00154: 653314-663919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00154: 653314-663313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 10.0kb downstream 10.0kb downstream 10606 true AmTr_v1.0_scaffold00154: 663314-673919 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.42 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00154: 663920-673919 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050939 5273 Angiosperm View MSA
121349024 5274 Embryophyte View MSA
123381128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain