Gene : evm_27.TU.AmTr_v1.0_scaffold00154.38 A. trichopoda v1.0
Defline:  (1 of 26) PF03169 - OPT oligopeptide transporter protein (OPT) Genomic Order:  37
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00154.38 Secondary Identifier:  ? PAC:31549339
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00154.38 0.5kb upstream 0.5kb upstream 1562 true AmTr_v1.0_scaffold00154: 634754-636315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00154: 634754-635253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 0.5kb downstream 0.5kb downstream 1562 true AmTr_v1.0_scaffold00154: 635254-636815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00154: 636316-636815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 1.0kb upstream 1.0kb upstream 2062 true AmTr_v1.0_scaffold00154: 634254-636315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00154: 634254-635253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 1.0kb downstream 1.0kb downstream 2062 true AmTr_v1.0_scaffold00154: 635254-637315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00154: 636316-637315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 2.0kb upstream 2.0kb upstream 3062 true AmTr_v1.0_scaffold00154: 633254-636315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00154: 633254-635253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 2.0kb downstream 2.0kb downstream 3062 true AmTr_v1.0_scaffold00154: 635254-638315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00154: 636316-638315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 5.0kb upstream 5.0kb upstream 6062 true AmTr_v1.0_scaffold00154: 630254-636315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00154: 630254-635253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 5.0kb downstream 5.0kb downstream 6062 true AmTr_v1.0_scaffold00154: 635254-641315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00154: 636316-641315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 10.0kb upstream 10.0kb upstream 11062 true AmTr_v1.0_scaffold00154: 625254-636315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00154: 625254-635253 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 10.0kb downstream 10.0kb downstream 11062 true AmTr_v1.0_scaffold00154: 635254-646315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.38 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00154: 636316-646315 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050939 5273 Angiosperm View MSA
121349024 5274 Embryophyte View MSA
123381128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain