Gene : evm_27.TU.AmTr_v1.0_scaffold00154.53 A. trichopoda v1.0
Defline:  (1 of 5) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Genomic Order:  52
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00154.53 Secondary Identifier:  ? PAC:31549328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00154.53 0.5kb upstream 0.5kb upstream 8200 true AmTr_v1.0_scaffold00154: 893644-901843 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00154: 901344-901843 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 0.5kb downstream 0.5kb downstream 8200 true AmTr_v1.0_scaffold00154: 893144-901343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00154: 893144-893643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 1.0kb upstream 1.0kb upstream 8700 true AmTr_v1.0_scaffold00154: 893644-902343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00154: 901344-902343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 1.0kb downstream 1.0kb downstream 8700 true AmTr_v1.0_scaffold00154: 892644-901343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00154: 892644-893643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 2.0kb upstream 2.0kb upstream 9700 true AmTr_v1.0_scaffold00154: 893644-903343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00154: 901344-903343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 2.0kb downstream 2.0kb downstream 9700 true AmTr_v1.0_scaffold00154: 891644-901343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00154: 891644-893643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 5.0kb upstream 5.0kb upstream 12700 true AmTr_v1.0_scaffold00154: 893644-906343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00154: 901344-906343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 5.0kb downstream 5.0kb downstream 12700 true AmTr_v1.0_scaffold00154: 888644-901343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00154: 888644-893643 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 10.0kb upstream 10.0kb upstream 17700 true AmTr_v1.0_scaffold00154: 893644-911343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00154: 901344-911343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 10.0kb downstream 10.0kb downstream 17700 true AmTr_v1.0_scaffold00154: 883644-901343 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.53 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00154: 883644-893643 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043691 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain