Gene : evm_27.TU.AmTr_v1.0_scaffold00154.36 A. trichopoda v1.0
Defline:  (1 of 17) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  35
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00154.36 Secondary Identifier:  ? PAC:31549355
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00154.36 0.5kb upstream 0.5kb upstream 869 true AmTr_v1.0_scaffold00154: 574672-575540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00154: 575041-575540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 0.5kb downstream 0.5kb downstream 869 true AmTr_v1.0_scaffold00154: 574172-575040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00154: 574172-574671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 1.0kb upstream 1.0kb upstream 1369 true AmTr_v1.0_scaffold00154: 574672-576040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00154: 575041-576040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 1.0kb downstream 1.0kb downstream 1369 true AmTr_v1.0_scaffold00154: 573672-575040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00154: 573672-574671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 2.0kb upstream 2.0kb upstream 2369 true AmTr_v1.0_scaffold00154: 574672-577040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00154: 575041-577040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 2.0kb downstream 2.0kb downstream 2369 true AmTr_v1.0_scaffold00154: 572672-575040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00154: 572672-574671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 5.0kb upstream 5.0kb upstream 5369 true AmTr_v1.0_scaffold00154: 574672-580040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00154: 575041-580040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 5.0kb downstream 5.0kb downstream 5369 true AmTr_v1.0_scaffold00154: 569672-575040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00154: 569672-574671 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 10.0kb upstream 10.0kb upstream 10369 true AmTr_v1.0_scaffold00154: 574672-585040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00154: 575041-585040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 10.0kb downstream 10.0kb downstream 10369 true AmTr_v1.0_scaffold00154: 564672-575040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00154.36 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00154: 564672-574671 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain