Gene : evm_27.TU.AmTr_v1.0_scaffold00153.53 A. trichopoda v1.0
Genomic Order:  53 Name:  ? evm_27.TU.AmTr_v1.0_scaffold00153.53
Secondary Identifier:  ? PAC:31558025
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00153.53 0.5kb upstream 0.5kb upstream 1073 true AmTr_v1.0_scaffold00153: 1063188-1064260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00153: 1063761-1064260 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 0.5kb downstream 0.5kb downstream 1073 true AmTr_v1.0_scaffold00153: 1062688-1063760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00153: 1062688-1063187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 1.0kb upstream 1.0kb upstream 1573 true AmTr_v1.0_scaffold00153: 1063188-1064760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00153: 1063761-1064760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 1.0kb downstream 1.0kb downstream 1573 true AmTr_v1.0_scaffold00153: 1062188-1063760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00153: 1062188-1063187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 2.0kb upstream 2.0kb upstream 2573 true AmTr_v1.0_scaffold00153: 1063188-1065760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00153: 1063761-1065760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 2.0kb downstream 2.0kb downstream 2573 true AmTr_v1.0_scaffold00153: 1061188-1063760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00153: 1061188-1063187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 5.0kb upstream 5.0kb upstream 5573 true AmTr_v1.0_scaffold00153: 1063188-1068760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00153: 1063761-1068760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 5.0kb downstream 5.0kb downstream 5573 true AmTr_v1.0_scaffold00153: 1058188-1063760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00153: 1058188-1063187 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 10.0kb upstream 10.0kb upstream 10573 true AmTr_v1.0_scaffold00153: 1063188-1073760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00153: 1063761-1073760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 10.0kb downstream 10.0kb downstream 10573 true AmTr_v1.0_scaffold00153: 1053188-1063760 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.53 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00153: 1053188-1063187 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122037547 5273 Angiosperm Singleton cluster - no MSA
121306446 5274 Embryophyte Singleton cluster - no MSA
123344114 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain