Gene : evm_27.TU.AmTr_v1.0_scaffold00153.4 A. trichopoda v1.0
Defline:  (1 of 12) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  4
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00153.4 Secondary Identifier:  ? PAC:31558039
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00153.4 0.5kb upstream 0.5kb upstream 1028 true AmTr_v1.0_scaffold00153: 56859-57886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00153: 57387-57886 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 0.5kb downstream 0.5kb downstream 1028 true AmTr_v1.0_scaffold00153: 56359-57386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00153: 56359-56858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 1.0kb upstream 1.0kb upstream 1528 true AmTr_v1.0_scaffold00153: 56859-58386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00153: 57387-58386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 1.0kb downstream 1.0kb downstream 1528 true AmTr_v1.0_scaffold00153: 55859-57386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00153: 55859-56858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 2.0kb upstream 2.0kb upstream 2528 true AmTr_v1.0_scaffold00153: 56859-59386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00153: 57387-59386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 2.0kb downstream 2.0kb downstream 2528 true AmTr_v1.0_scaffold00153: 54859-57386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00153: 54859-56858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 5.0kb upstream 5.0kb upstream 5528 true AmTr_v1.0_scaffold00153: 56859-62386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00153: 57387-62386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 5.0kb downstream 5.0kb downstream 5528 true AmTr_v1.0_scaffold00153: 51859-57386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00153: 51859-56858 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 10.0kb upstream 10.0kb upstream 10528 true AmTr_v1.0_scaffold00153: 56859-67386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00153: 57387-67386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 10.0kb downstream 10.0kb downstream 10528 true AmTr_v1.0_scaffold00153: 46859-57386 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00153.4 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00153: 46859-56858 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047345 5273 Angiosperm View MSA
121310733 5274 Embryophyte View MSA
123348146 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain