Gene : evm_27.TU.AmTr_v1.0_scaffold00149.9 A. trichopoda v1.0
Defline:  (1 of 1) PF07086 - Jagunal, ER re-organisation during oogenesis (Jagunal) Genomic Order:  9
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00149.9 Secondary Identifier:  ? PAC:31570764
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00149.9 0.5kb upstream 0.5kb upstream 8682 true AmTr_v1.0_scaffold00149: 211717-220398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00149: 211717-212216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 0.5kb downstream 0.5kb downstream 8682 true AmTr_v1.0_scaffold00149: 212217-220898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00149: 220399-220898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 1.0kb upstream 1.0kb upstream 9182 true AmTr_v1.0_scaffold00149: 211217-220398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00149: 211217-212216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 1.0kb downstream 1.0kb downstream 9182 true AmTr_v1.0_scaffold00149: 212217-221398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00149: 220399-221398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 2.0kb upstream 2.0kb upstream 10182 true AmTr_v1.0_scaffold00149: 210217-220398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00149: 210217-212216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 2.0kb downstream 2.0kb downstream 10182 true AmTr_v1.0_scaffold00149: 212217-222398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00149: 220399-222398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 5.0kb upstream 5.0kb upstream 13182 true AmTr_v1.0_scaffold00149: 207217-220398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00149: 207217-212216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 5.0kb downstream 5.0kb downstream 13182 true AmTr_v1.0_scaffold00149: 212217-225398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00149: 220399-225398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 10.0kb upstream 10.0kb upstream 18182 true AmTr_v1.0_scaffold00149: 202217-220398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00149: 202217-212216 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 10.0kb downstream 10.0kb downstream 18182 true AmTr_v1.0_scaffold00149: 212217-230398 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.9 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00149: 220399-230398 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045382 5273 Angiosperm View MSA
121344737 5274 Embryophyte View MSA
123427393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain