Gene : evm_27.TU.AmTr_v1.0_scaffold00149.8 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11353:SF23 - T-COMPLEX PROTEIN 1 SUBUNIT BETA Genomic Order:  8
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00149.8 Secondary Identifier:  ? PAC:31570735
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00149.8 0.5kb upstream 0.5kb upstream 27697 true AmTr_v1.0_scaffold00149: 158219-185915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00149: 158219-158718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 0.5kb downstream 0.5kb downstream 27697 true AmTr_v1.0_scaffold00149: 158719-186415 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00149: 185916-186415 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 1.0kb upstream 1.0kb upstream 28197 true AmTr_v1.0_scaffold00149: 157719-185915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00149: 157719-158718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 1.0kb downstream 1.0kb downstream 28197 true AmTr_v1.0_scaffold00149: 158719-186915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00149: 185916-186915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 2.0kb upstream 2.0kb upstream 29197 true AmTr_v1.0_scaffold00149: 156719-185915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00149: 156719-158718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 2.0kb downstream 2.0kb downstream 29197 true AmTr_v1.0_scaffold00149: 158719-187915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00149: 185916-187915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 5.0kb upstream 5.0kb upstream 32197 true AmTr_v1.0_scaffold00149: 153719-185915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00149: 153719-158718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 5.0kb downstream 5.0kb downstream 32197 true AmTr_v1.0_scaffold00149: 158719-190915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00149: 185916-190915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 10.0kb upstream 10.0kb upstream 37197 true AmTr_v1.0_scaffold00149: 148719-185915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00149: 148719-158718 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 10.0kb downstream 10.0kb downstream 37197 true AmTr_v1.0_scaffold00149: 158719-195915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.8 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00149: 185916-195915 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042218 5273 Angiosperm View MSA
121346616 5274 Embryophyte View MSA
123426772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain