Gene : evm_27.TU.AmTr_v1.0_scaffold00149.55 A. trichopoda v1.0
Defline:  (1 of 1) PTHR31747:SF1 - PROTEIN LOL1 Genomic Order:  55
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00149.55 Secondary Identifier:  ? PAC:31570718
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00149.55 0.5kb upstream 0.5kb upstream 2933 true AmTr_v1.0_scaffold00149: 827159-830091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00149: 827159-827658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 0.5kb downstream 0.5kb downstream 2933 true AmTr_v1.0_scaffold00149: 827659-830591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00149: 830092-830591 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 1.0kb upstream 1.0kb upstream 3433 true AmTr_v1.0_scaffold00149: 826659-830091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00149: 826659-827658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 1.0kb downstream 1.0kb downstream 3433 true AmTr_v1.0_scaffold00149: 827659-831091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00149: 830092-831091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 2.0kb upstream 2.0kb upstream 4433 true AmTr_v1.0_scaffold00149: 825659-830091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00149: 825659-827658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 2.0kb downstream 2.0kb downstream 4433 true AmTr_v1.0_scaffold00149: 827659-832091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00149: 830092-832091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 5.0kb upstream 5.0kb upstream 7433 true AmTr_v1.0_scaffold00149: 822659-830091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00149: 822659-827658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 5.0kb downstream 5.0kb downstream 7433 true AmTr_v1.0_scaffold00149: 827659-835091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00149: 830092-835091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 10.0kb upstream 10.0kb upstream 12433 true AmTr_v1.0_scaffold00149: 817659-830091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00149: 817659-827658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 10.0kb downstream 10.0kb downstream 12433 true AmTr_v1.0_scaffold00149: 827659-840091 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00149.55 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00149: 830092-840091 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043941 5273 Angiosperm View MSA
121347680 5274 Embryophyte View MSA
123425652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain