Gene : evm_27.TU.AmTr_v1.0_scaffold00148.57 A. trichopoda v1.0
Defline:  (1 of 15) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  57
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00148.57 Secondary Identifier:  ? PAC:31556808
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00148.57 0.5kb upstream 0.5kb upstream 9218 true AmTr_v1.0_scaffold00148: 973705-982922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00148: 982423-982922 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 0.5kb downstream 0.5kb downstream 9218 true AmTr_v1.0_scaffold00148: 973205-982422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00148: 973205-973704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 1.0kb upstream 1.0kb upstream 9718 true AmTr_v1.0_scaffold00148: 973705-983422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00148: 982423-983422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 1.0kb downstream 1.0kb downstream 9718 true AmTr_v1.0_scaffold00148: 972705-982422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00148: 972705-973704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 2.0kb upstream 2.0kb upstream 10718 true AmTr_v1.0_scaffold00148: 973705-984422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00148: 982423-984422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 2.0kb downstream 2.0kb downstream 10718 true AmTr_v1.0_scaffold00148: 971705-982422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00148: 971705-973704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 5.0kb upstream 5.0kb upstream 13718 true AmTr_v1.0_scaffold00148: 973705-987422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00148: 982423-987422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 5.0kb downstream 5.0kb downstream 13718 true AmTr_v1.0_scaffold00148: 968705-982422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00148: 968705-973704 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 10.0kb upstream 10.0kb upstream 18718 true AmTr_v1.0_scaffold00148: 973705-992422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00148: 982423-992422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 10.0kb downstream 10.0kb downstream 18718 true AmTr_v1.0_scaffold00148: 963705-982422 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.57 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00148: 963705-973704 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain