Gene : evm_27.TU.AmTr_v1.0_scaffold00148.44 A. trichopoda v1.0

Defline:  (1 of 2) KOG4422 - Uncharacterized conserved protein Genomic Order:  44
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00148.44 Secondary Identifier:  ? PAC:31556757

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00148.44 0.5kb upstream 0.5kb upstream 2768 true AmTr_v1.0_scaffold00148: 743048-745815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00148: 745316-745815 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 0.5kb downstream 0.5kb downstream 2768 true AmTr_v1.0_scaffold00148: 742548-745315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00148: 742548-743047 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 1.0kb upstream 1.0kb upstream 3268 true AmTr_v1.0_scaffold00148: 743048-746315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00148: 745316-746315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 1.0kb downstream 1.0kb downstream 3268 true AmTr_v1.0_scaffold00148: 742048-745315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00148: 742048-743047 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 2.0kb upstream 2.0kb upstream 4268 true AmTr_v1.0_scaffold00148: 743048-747315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00148: 745316-747315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 2.0kb downstream 2.0kb downstream 4268 true AmTr_v1.0_scaffold00148: 741048-745315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00148: 741048-743047 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 5.0kb upstream 5.0kb upstream 7268 true AmTr_v1.0_scaffold00148: 743048-750315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00148: 745316-750315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 5.0kb downstream 5.0kb downstream 7268 true AmTr_v1.0_scaffold00148: 738048-745315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00148: 738048-743047 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 10.0kb upstream 10.0kb upstream 12268 true AmTr_v1.0_scaffold00148: 743048-755315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00148: 745316-755315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 10.0kb downstream 10.0kb downstream 12268 true AmTr_v1.0_scaffold00148: 733048-745315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.44 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00148: 733048-743047 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046453 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310608 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain