Gene : evm_27.TU.AmTr_v1.0_scaffold00148.59 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  59
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00148.59 Secondary Identifier:  ? PAC:31556765
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-1121 Amborella trichopoda pathologic  
Atrichopoda PWY1F-467 Amborella trichopoda pathologic  
Atrichopoda PWY-7186 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00148.59 0.5kb upstream 0.5kb upstream 2633 true AmTr_v1.0_scaffold00148: 1029999-1032631 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00148: 1032132-1032631 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 0.5kb downstream 0.5kb downstream 2633 true AmTr_v1.0_scaffold00148: 1029499-1032131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00148: 1029499-1029998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 1.0kb upstream 1.0kb upstream 3133 true AmTr_v1.0_scaffold00148: 1029999-1033131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00148: 1032132-1033131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 1.0kb downstream 1.0kb downstream 3133 true AmTr_v1.0_scaffold00148: 1028999-1032131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00148: 1028999-1029998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 2.0kb upstream 2.0kb upstream 4133 true AmTr_v1.0_scaffold00148: 1029999-1034131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00148: 1032132-1034131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 2.0kb downstream 2.0kb downstream 4133 true AmTr_v1.0_scaffold00148: 1027999-1032131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00148: 1027999-1029998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 5.0kb upstream 5.0kb upstream 7133 true AmTr_v1.0_scaffold00148: 1029999-1037131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00148: 1032132-1037131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 5.0kb downstream 5.0kb downstream 7133 true AmTr_v1.0_scaffold00148: 1024999-1032131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00148: 1024999-1029998 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 10.0kb upstream 10.0kb upstream 12133 true AmTr_v1.0_scaffold00148: 1029999-1042131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00148: 1032132-1042131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 10.0kb downstream 10.0kb downstream 12133 true AmTr_v1.0_scaffold00148: 1019999-1032131 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.59 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00148: 1019999-1029998 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain