Gene : evm_27.TU.AmTr_v1.0_scaffold00148.5 A. trichopoda v1.0
Defline:  (1 of 1) PF04096//PF12110 - Nucleoporin autopeptidase (Nucleoporin2) // Nuclear protein 96 (Nup96) Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00148.5 Secondary Identifier:  ? PAC:31556766
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00148.5 0.5kb upstream 0.5kb upstream 10099 true AmTr_v1.0_scaffold00148: 69564-79662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00148: 79163-79662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 0.5kb downstream 0.5kb downstream 10099 true AmTr_v1.0_scaffold00148: 69064-79162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00148: 69064-69563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 1.0kb upstream 1.0kb upstream 10599 true AmTr_v1.0_scaffold00148: 69564-80162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00148: 79163-80162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 1.0kb downstream 1.0kb downstream 10599 true AmTr_v1.0_scaffold00148: 68564-79162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00148: 68564-69563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 2.0kb upstream 2.0kb upstream 11599 true AmTr_v1.0_scaffold00148: 69564-81162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00148: 79163-81162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 2.0kb downstream 2.0kb downstream 11599 true AmTr_v1.0_scaffold00148: 67564-79162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00148: 67564-69563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 5.0kb upstream 5.0kb upstream 14599 true AmTr_v1.0_scaffold00148: 69564-84162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00148: 79163-84162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 5.0kb downstream 5.0kb downstream 14599 true AmTr_v1.0_scaffold00148: 64564-79162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00148: 64564-69563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 10.0kb upstream 10.0kb upstream 19599 true AmTr_v1.0_scaffold00148: 69564-89162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00148: 79163-89162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 10.0kb downstream 10.0kb downstream 19599 true AmTr_v1.0_scaffold00148: 59564-79162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00148.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00148: 59564-69563 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain