Gene : evm_27.TU.AmTr_v1.0_scaffold00147.55 A. trichopoda v1.0
Defline:  (1 of 1) PTHR34262:SF1 - TRANSMEMBRANE PROTEIN 220 Genomic Order:  55
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00147.55 Secondary Identifier:  ? PAC:31557553
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Genomics

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00147.55 0.5kb upstream 0.5kb upstream 3819 true AmTr_v1.0_scaffold00147: 1171536-1175354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00147: 1171536-1172035 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 0.5kb downstream 0.5kb downstream 3819 true AmTr_v1.0_scaffold00147: 1172036-1175854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00147: 1175355-1175854 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 1.0kb upstream 1.0kb upstream 4319 true AmTr_v1.0_scaffold00147: 1171036-1175354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00147: 1171036-1172035 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 1.0kb downstream 1.0kb downstream 4319 true AmTr_v1.0_scaffold00147: 1172036-1176354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00147: 1175355-1176354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 2.0kb upstream 2.0kb upstream 5319 true AmTr_v1.0_scaffold00147: 1170036-1175354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00147: 1170036-1172035 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 2.0kb downstream 2.0kb downstream 5319 true AmTr_v1.0_scaffold00147: 1172036-1177354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00147: 1175355-1177354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 5.0kb upstream 5.0kb upstream 8319 true AmTr_v1.0_scaffold00147: 1167036-1175354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00147: 1167036-1172035 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 5.0kb downstream 5.0kb downstream 8319 true AmTr_v1.0_scaffold00147: 1172036-1180354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00147: 1175355-1180354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 10.0kb upstream 10.0kb upstream 13319 true AmTr_v1.0_scaffold00147: 1162036-1175354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00147: 1162036-1172035 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 10.0kb downstream 10.0kb downstream 13319 true AmTr_v1.0_scaffold00147: 1172036-1185354 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00147.55 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00147: 1175355-1185354 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041844 5273 Angiosperm View MSA
121344309 5274 Embryophyte View MSA
123380020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain