Gene : evm_27.TU.AmTr_v1.0_scaffold00135.53 A. trichopoda v1.0
Defline:  (1 of 464) PF01535 - PPR repeat (PPR) Genomic Order:  52
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00135.53 Secondary Identifier:  ? PAC:31560945
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00135.53 0.5kb upstream 0.5kb upstream 1739 true AmTr_v1.0_scaffold00135: 1122093-1123831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00135: 1122093-1122592 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 0.5kb downstream 0.5kb downstream 1739 true AmTr_v1.0_scaffold00135: 1122593-1124331 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00135: 1123832-1124331 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 1.0kb upstream 1.0kb upstream 2239 true AmTr_v1.0_scaffold00135: 1121593-1123831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00135: 1121593-1122592 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 1.0kb downstream 1.0kb downstream 2239 true AmTr_v1.0_scaffold00135: 1122593-1124831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00135: 1123832-1124831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 2.0kb upstream 2.0kb upstream 3239 true AmTr_v1.0_scaffold00135: 1120593-1123831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00135: 1120593-1122592 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 2.0kb downstream 2.0kb downstream 3239 true AmTr_v1.0_scaffold00135: 1122593-1125831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00135: 1123832-1125831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 5.0kb upstream 5.0kb upstream 6239 true AmTr_v1.0_scaffold00135: 1117593-1123831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00135: 1117593-1122592 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 5.0kb downstream 5.0kb downstream 6239 true AmTr_v1.0_scaffold00135: 1122593-1128831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00135: 1123832-1128831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 10.0kb upstream 10.0kb upstream 11239 true AmTr_v1.0_scaffold00135: 1112593-1123831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00135: 1112593-1122592 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 10.0kb downstream 10.0kb downstream 11239 true AmTr_v1.0_scaffold00135: 1122593-1133831 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.53 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00135: 1123832-1133831 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain