Gene : evm_27.TU.AmTr_v1.0_scaffold00135.25 A. trichopoda v1.0
Defline:  (1 of 3) PTHR15319:SF1 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C Genomic Order:  25
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00135.25 Secondary Identifier:  ? PAC:31560911
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00135.25 0.5kb upstream 0.5kb upstream 1826 true AmTr_v1.0_scaffold00135: 600287-602112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00135: 600287-600786 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 0.5kb downstream 0.5kb downstream 1826 true AmTr_v1.0_scaffold00135: 600787-602612 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00135: 602113-602612 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 1.0kb upstream 1.0kb upstream 2326 true AmTr_v1.0_scaffold00135: 599787-602112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00135: 599787-600786 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 1.0kb downstream 1.0kb downstream 2326 true AmTr_v1.0_scaffold00135: 600787-603112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00135: 602113-603112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 2.0kb upstream 2.0kb upstream 3326 true AmTr_v1.0_scaffold00135: 598787-602112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00135: 598787-600786 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 2.0kb downstream 2.0kb downstream 3326 true AmTr_v1.0_scaffold00135: 600787-604112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00135: 602113-604112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 5.0kb upstream 5.0kb upstream 6326 true AmTr_v1.0_scaffold00135: 595787-602112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00135: 595787-600786 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 5.0kb downstream 5.0kb downstream 6326 true AmTr_v1.0_scaffold00135: 600787-607112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00135: 602113-607112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 10.0kb upstream 10.0kb upstream 11326 true AmTr_v1.0_scaffold00135: 590787-602112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00135: 590787-600786 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 10.0kb downstream 10.0kb downstream 11326 true AmTr_v1.0_scaffold00135: 600787-612112 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.25 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00135: 602113-612112 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049864 5273 Angiosperm View MSA
121348970 5274 Embryophyte View MSA
123381106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain