Gene : evm_27.TU.AmTr_v1.0_scaffold00135.20 A. trichopoda v1.0
Defline:  (1 of 2) 5.3.1.9 - Glucose-6-phosphate isomerase / Phosphosaccharomutase Genomic Order:  20
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00135.20 Secondary Identifier:  ? PAC:31560971
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ANAEROFRUCAT-PWY Amborella trichopoda pathologic  
Atrichopoda ANAGLYCOLYSIS-PWY Amborella trichopoda pathologic  
Atrichopoda GLUCONEO-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3801 Amborella trichopoda pathologic  
Atrichopoda PWY-5659 Amborella trichopoda pathologic  
Atrichopoda PWY-621 Amborella trichopoda pathologic  
Atrichopoda PWY-622 Amborella trichopoda pathologic  
Atrichopoda PWY-7238 Amborella trichopoda pathologic  
Atrichopoda SUCSYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00135.20 0.5kb upstream 0.5kb upstream 23741 true AmTr_v1.0_scaffold00135: 500675-524415 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00135: 523916-524415 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 0.5kb downstream 0.5kb downstream 23741 true AmTr_v1.0_scaffold00135: 500175-523915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00135: 500175-500674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 1.0kb upstream 1.0kb upstream 24241 true AmTr_v1.0_scaffold00135: 500675-524915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00135: 523916-524915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 1.0kb downstream 1.0kb downstream 24241 true AmTr_v1.0_scaffold00135: 499675-523915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00135: 499675-500674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 2.0kb upstream 2.0kb upstream 25241 true AmTr_v1.0_scaffold00135: 500675-525915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00135: 523916-525915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 2.0kb downstream 2.0kb downstream 25241 true AmTr_v1.0_scaffold00135: 498675-523915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00135: 498675-500674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 5.0kb upstream 5.0kb upstream 28241 true AmTr_v1.0_scaffold00135: 500675-528915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00135: 523916-528915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 5.0kb downstream 5.0kb downstream 28241 true AmTr_v1.0_scaffold00135: 495675-523915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00135: 495675-500674 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 10.0kb upstream 10.0kb upstream 33241 true AmTr_v1.0_scaffold00135: 500675-533915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00135: 523916-533915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 10.0kb downstream 10.0kb downstream 33241 true AmTr_v1.0_scaffold00135: 490675-523915 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00135.20 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00135: 490675-500674 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048619 5273 Angiosperm View MSA
121347898 5274 Embryophyte View MSA
123424804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain