Gene : evm_27.TU.AmTr_v1.0_scaffold00239.4 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23416:SF2 - SERINE ACETYLTRANSFERASE 5 Genomic Order:  4
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00239.4 Secondary Identifier:  ? PAC:31557559
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CYSTSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-6936 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00239.4 0.5kb upstream 0.5kb upstream 1496 true AmTr_v1.0_scaffold00239: 95618-97113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00239: 95618-96117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 0.5kb downstream 0.5kb downstream 1496 true AmTr_v1.0_scaffold00239: 96118-97613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00239: 97114-97613 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 1.0kb upstream 1.0kb upstream 1996 true AmTr_v1.0_scaffold00239: 95118-97113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00239: 95118-96117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 1.0kb downstream 1.0kb downstream 1996 true AmTr_v1.0_scaffold00239: 96118-98113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00239: 97114-98113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 2.0kb upstream 2.0kb upstream 2996 true AmTr_v1.0_scaffold00239: 94118-97113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00239: 94118-96117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 2.0kb downstream 2.0kb downstream 2996 true AmTr_v1.0_scaffold00239: 96118-99113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00239: 97114-99113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 5.0kb upstream 5.0kb upstream 5996 true AmTr_v1.0_scaffold00239: 91118-97113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00239: 91118-96117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 5.0kb downstream 5.0kb downstream 5996 true AmTr_v1.0_scaffold00239: 96118-102113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00239: 97114-102113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 10.0kb upstream 10.0kb upstream 10996 true AmTr_v1.0_scaffold00239: 86118-97113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00239: 86118-96117 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 10.0kb downstream 10.0kb downstream 10996 true AmTr_v1.0_scaffold00239: 96118-107113 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00239.4 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00239: 97114-107113 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain