Gene : evm_27.TU.AmTr_v1.0_scaffold00233.2 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC Genomic Order:  2
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00233.2 Secondary Identifier:  ? PAC:31557965
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00233.2 0.5kb upstream 0.5kb upstream 16741 true AmTr_v1.0_scaffold00233: 86669-103409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00233: 102910-103409 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 0.5kb downstream 0.5kb downstream 16741 true AmTr_v1.0_scaffold00233: 86169-102909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00233: 86169-86668 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 1.0kb upstream 1.0kb upstream 17241 true AmTr_v1.0_scaffold00233: 86669-103909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00233: 102910-103909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 1.0kb downstream 1.0kb downstream 17241 true AmTr_v1.0_scaffold00233: 85669-102909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00233: 85669-86668 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 2.0kb upstream 2.0kb upstream 18241 true AmTr_v1.0_scaffold00233: 86669-104909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00233: 102910-104909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 2.0kb downstream 2.0kb downstream 18241 true AmTr_v1.0_scaffold00233: 84669-102909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00233: 84669-86668 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 5.0kb upstream 5.0kb upstream 21241 true AmTr_v1.0_scaffold00233: 86669-107909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00233: 102910-107909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 5.0kb downstream 5.0kb downstream 21241 true AmTr_v1.0_scaffold00233: 81669-102909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00233: 81669-86668 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 10.0kb upstream 10.0kb upstream 26241 true AmTr_v1.0_scaffold00233: 86669-112909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00233: 102910-112909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 10.0kb downstream 10.0kb downstream 26241 true AmTr_v1.0_scaffold00233: 76669-102909 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00233.2 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00233: 76669-86668 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045430 5273 Angiosperm View MSA
121344510 5274 Embryophyte View MSA
123428056 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain