Gene : evm_27.TU.AmTr_v1.0_scaffold00280.1 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12300//PTHR12300:SF50 - HVA22-LIKE PROTEINS Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00280.1 Secondary Identifier:  ? PAC:31571610
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0 Pathways

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00280.1 0.5kb upstream 0.5kb upstream 3551 true AmTr_v1.0_scaffold00280: 30987-34537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00280: 30987-31486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 0.5kb downstream 0.5kb downstream 3551 true AmTr_v1.0_scaffold00280: 31487-35037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00280: 34538-35037 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 1.0kb upstream 1.0kb upstream 4051 true AmTr_v1.0_scaffold00280: 30487-34537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00280: 30487-31486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 1.0kb downstream 1.0kb downstream 4051 true AmTr_v1.0_scaffold00280: 31487-35537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00280: 34538-35537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 2.0kb upstream 2.0kb upstream 5051 true AmTr_v1.0_scaffold00280: 29487-34537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00280: 29487-31486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 2.0kb downstream 2.0kb downstream 5051 true AmTr_v1.0_scaffold00280: 31487-36537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00280: 34538-36537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 5.0kb upstream 5.0kb upstream 8051 true AmTr_v1.0_scaffold00280: 26487-34537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00280: 26487-31486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 5.0kb downstream 5.0kb downstream 8051 true AmTr_v1.0_scaffold00280: 31487-39537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00280: 34538-39537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 10.0kb upstream 10.0kb upstream 13051 true AmTr_v1.0_scaffold00280: 21487-34537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00280: 21487-31486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 10.0kb downstream 10.0kb downstream 13051 true AmTr_v1.0_scaffold00280: 31487-44537 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00280.1 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00280: 34538-44537 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain