Gene : evm_27.TU.AmTr_v1.0_scaffold00164.10 A. trichopoda v1.0

Defline:  (1 of 1) PTHR12354 - INTERFERON-RELATED DEVELOPMENTAL REGULATOR Genomic Order:  10
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00164.10 Secondary Identifier:  ? PAC:31569127

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00164.10 0.5kb upstream 0.5kb upstream 8738 true AmTr_v1.0_scaffold00164: 211064-219801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00164: 219302-219801 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 0.5kb downstream 0.5kb downstream 8738 true AmTr_v1.0_scaffold00164: 210564-219301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00164: 210564-211063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 1.0kb upstream 1.0kb upstream 9238 true AmTr_v1.0_scaffold00164: 211064-220301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00164: 219302-220301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 1.0kb downstream 1.0kb downstream 9238 true AmTr_v1.0_scaffold00164: 210064-219301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00164: 210064-211063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 2.0kb upstream 2.0kb upstream 10238 true AmTr_v1.0_scaffold00164: 211064-221301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00164: 219302-221301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 2.0kb downstream 2.0kb downstream 10238 true AmTr_v1.0_scaffold00164: 209064-219301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00164: 209064-211063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 5.0kb upstream 5.0kb upstream 13238 true AmTr_v1.0_scaffold00164: 211064-224301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00164: 219302-224301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 5.0kb downstream 5.0kb downstream 13238 true AmTr_v1.0_scaffold00164: 206064-219301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00164: 206064-211063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 10.0kb upstream 10.0kb upstream 18238 true AmTr_v1.0_scaffold00164: 211064-229301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00164: 219302-229301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 10.0kb downstream 10.0kb downstream 18238 true AmTr_v1.0_scaffold00164: 201064-219301 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00164.10 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00164: 201064-211063 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043831 5273 Angiosperm View MSA
121349485 5274 Embryophyte View MSA
123428444 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain