Gene : evm_27.TU.AmTr_v1.0_scaffold00161.24 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21600 - RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B Genomic Order:  24
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00161.24 Secondary Identifier:  ? PAC:31561361
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00161.24 0.5kb upstream 0.5kb upstream 31691 true AmTr_v1.0_scaffold00161: 656230-687920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00161: 656230-656729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 0.5kb downstream 0.5kb downstream 31691 true AmTr_v1.0_scaffold00161: 656730-688420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00161: 687921-688420 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 1.0kb upstream 1.0kb upstream 32191 true AmTr_v1.0_scaffold00161: 655730-687920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00161: 655730-656729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 1.0kb downstream 1.0kb downstream 32191 true AmTr_v1.0_scaffold00161: 656730-688920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00161: 687921-688920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 2.0kb upstream 2.0kb upstream 33191 true AmTr_v1.0_scaffold00161: 654730-687920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00161: 654730-656729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 2.0kb downstream 2.0kb downstream 33191 true AmTr_v1.0_scaffold00161: 656730-689920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00161: 687921-689920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 5.0kb upstream 5.0kb upstream 36191 true AmTr_v1.0_scaffold00161: 651730-687920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00161: 651730-656729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 5.0kb downstream 5.0kb downstream 36191 true AmTr_v1.0_scaffold00161: 656730-692920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00161: 687921-692920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 10.0kb upstream 10.0kb upstream 41191 true AmTr_v1.0_scaffold00161: 646730-687920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00161: 646730-656729 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 10.0kb downstream 10.0kb downstream 41191 true AmTr_v1.0_scaffold00161: 656730-697920 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00161.24 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00161: 687921-697920 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046867 5273 Angiosperm View MSA
121350601 5274 Embryophyte View MSA
123427017 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain