Gene : evm_27.TU.AmTr_v1.0_scaffold00159.8 A. trichopoda v1.0
Defline:  (1 of 1) 2.5.1.22 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  8
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00159.8 Secondary Identifier:  ? PAC:31570821
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda ARGSPECAT-PWY Amborella trichopoda pathologic  
Atrichopoda BSUBPOLYAMSYN-PWY Amborella trichopoda pathologic  
Atrichopoda POLYAMINSYN3-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-7528 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00159.8 0.5kb upstream 0.5kb upstream 28899 true AmTr_v1.0_scaffold00159: 117143-146041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00159: 145542-146041 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 0.5kb downstream 0.5kb downstream 28899 true AmTr_v1.0_scaffold00159: 116643-145541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00159: 116643-117142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 1.0kb upstream 1.0kb upstream 29399 true AmTr_v1.0_scaffold00159: 117143-146541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00159: 145542-146541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 1.0kb downstream 1.0kb downstream 29399 true AmTr_v1.0_scaffold00159: 116143-145541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00159: 116143-117142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 2.0kb upstream 2.0kb upstream 30399 true AmTr_v1.0_scaffold00159: 117143-147541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00159: 145542-147541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 2.0kb downstream 2.0kb downstream 30399 true AmTr_v1.0_scaffold00159: 115143-145541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00159: 115143-117142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 5.0kb upstream 5.0kb upstream 33399 true AmTr_v1.0_scaffold00159: 117143-150541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00159: 145542-150541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 5.0kb downstream 5.0kb downstream 33399 true AmTr_v1.0_scaffold00159: 112143-145541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00159: 112143-117142 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 10.0kb upstream 10.0kb upstream 38399 true AmTr_v1.0_scaffold00159: 117143-155541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00159: 145542-155541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 10.0kb downstream 10.0kb downstream 38399 true AmTr_v1.0_scaffold00159: 107143-145541 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00159.8 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00159: 107143-117142 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain