Gene : evm_27.TU.AmTr_v1.0_scaffold00157.17 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10643 - KINETOCHORE PROTEIN NDC80 Genomic Order:  17
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00157.17 Secondary Identifier:  ? PAC:31567356
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00157.17 0.5kb upstream 0.5kb upstream 5299 true AmTr_v1.0_scaffold00157: 476799-482097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00157: 476799-477298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 0.5kb downstream 0.5kb downstream 5299 true AmTr_v1.0_scaffold00157: 477299-482597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00157: 482098-482597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 1.0kb upstream 1.0kb upstream 5799 true AmTr_v1.0_scaffold00157: 476299-482097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00157: 476299-477298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 1.0kb downstream 1.0kb downstream 5799 true AmTr_v1.0_scaffold00157: 477299-483097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00157: 482098-483097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 2.0kb upstream 2.0kb upstream 6799 true AmTr_v1.0_scaffold00157: 475299-482097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00157: 475299-477298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 2.0kb downstream 2.0kb downstream 6799 true AmTr_v1.0_scaffold00157: 477299-484097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00157: 482098-484097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 5.0kb upstream 5.0kb upstream 9799 true AmTr_v1.0_scaffold00157: 472299-482097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00157: 472299-477298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 5.0kb downstream 5.0kb downstream 9799 true AmTr_v1.0_scaffold00157: 477299-487097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00157: 482098-487097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 10.0kb upstream 10.0kb upstream 14799 true AmTr_v1.0_scaffold00157: 467299-482097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00157: 467299-477298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 10.0kb downstream 10.0kb downstream 14799 true AmTr_v1.0_scaffold00157: 477299-492097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.17 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00157: 482098-492097 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049067 5273 Angiosperm View MSA
121344778 5274 Embryophyte View MSA
123428580 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain