Gene : evm_27.TU.AmTr_v1.0_scaffold00157.16 A. trichopoda v1.0
Defline:  (1 of 5) PF05514 - HR-like lesion-inducing (HR_lesion) Genomic Order:  16
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00157.16 Secondary Identifier:  ? PAC:31567376
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00157.16 0.5kb upstream 0.5kb upstream 860 true AmTr_v1.0_scaffold00157: 473107-473966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00157: 473467-473966 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 0.5kb downstream 0.5kb downstream 860 true AmTr_v1.0_scaffold00157: 472607-473466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00157: 472607-473106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 1.0kb upstream 1.0kb upstream 1360 true AmTr_v1.0_scaffold00157: 473107-474466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00157: 473467-474466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 1.0kb downstream 1.0kb downstream 1360 true AmTr_v1.0_scaffold00157: 472107-473466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00157: 472107-473106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 2.0kb upstream 2.0kb upstream 2360 true AmTr_v1.0_scaffold00157: 473107-475466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00157: 473467-475466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 2.0kb downstream 2.0kb downstream 2360 true AmTr_v1.0_scaffold00157: 471107-473466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00157: 471107-473106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 5.0kb upstream 5.0kb upstream 5360 true AmTr_v1.0_scaffold00157: 473107-478466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00157: 473467-478466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 5.0kb downstream 5.0kb downstream 5360 true AmTr_v1.0_scaffold00157: 468107-473466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00157: 468107-473106 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 10.0kb upstream 10.0kb upstream 10360 true AmTr_v1.0_scaffold00157: 473107-483466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00157: 473467-483466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 10.0kb downstream 10.0kb downstream 10360 true AmTr_v1.0_scaffold00157: 463107-473466 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00157.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00157: 463107-473106 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122052085 5273 Angiosperm View MSA
121312945 5274 Embryophyte View MSA
123350081 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain