Gene : evm_27.TU.AmTr_v1.0_scaffold00156.27 A. trichopoda v1.0

Defline:  (1 of 1) PTHR31126:SF19 - ATYPICAL DUAL-SPECIFICITY PHOSPHATASE Genomic Order:  27
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00156.27 Secondary Identifier:  ? PAC:31553587

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00156.27 0.5kb upstream 0.5kb upstream 15458 true AmTr_v1.0_scaffold00156: 532325-547782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00156: 532325-532824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 0.5kb downstream 0.5kb downstream 15458 true AmTr_v1.0_scaffold00156: 532825-548282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00156: 547783-548282 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 1.0kb upstream 1.0kb upstream 15958 true AmTr_v1.0_scaffold00156: 531825-547782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00156: 531825-532824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 1.0kb downstream 1.0kb downstream 15958 true AmTr_v1.0_scaffold00156: 532825-548782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00156: 547783-548782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 2.0kb upstream 2.0kb upstream 16958 true AmTr_v1.0_scaffold00156: 530825-547782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00156: 530825-532824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 2.0kb downstream 2.0kb downstream 16958 true AmTr_v1.0_scaffold00156: 532825-549782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00156: 547783-549782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 5.0kb upstream 5.0kb upstream 19958 true AmTr_v1.0_scaffold00156: 527825-547782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00156: 527825-532824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 5.0kb downstream 5.0kb downstream 19958 true AmTr_v1.0_scaffold00156: 532825-552782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00156: 547783-552782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 10.0kb upstream 10.0kb upstream 24958 true AmTr_v1.0_scaffold00156: 522825-547782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00156: 522825-532824 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 10.0kb downstream 10.0kb downstream 24958 true AmTr_v1.0_scaffold00156: 532825-557782 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00156.27 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00156: 547783-557782 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122039065 5273 Angiosperm Singleton cluster - no MSA
121307959 5274 Embryophyte Singleton cluster - no MSA
123345627 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain