Gene : evm_27.TU.AmTr_v1.0_scaffold00182.5 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00182.5 Secondary Identifier:  ? PAC:31574972
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6441 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00182.5 0.5kb upstream 0.5kb upstream 11572 true AmTr_v1.0_scaffold00182: 44186-55757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00182: 44186-44685 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 0.5kb downstream 0.5kb downstream 11572 true AmTr_v1.0_scaffold00182: 44686-56257 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00182: 55758-56257 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 1.0kb upstream 1.0kb upstream 12072 true AmTr_v1.0_scaffold00182: 43686-55757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00182: 43686-44685 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 1.0kb downstream 1.0kb downstream 12072 true AmTr_v1.0_scaffold00182: 44686-56757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00182: 55758-56757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 2.0kb upstream 2.0kb upstream 13072 true AmTr_v1.0_scaffold00182: 42686-55757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00182: 42686-44685 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 2.0kb downstream 2.0kb downstream 13072 true AmTr_v1.0_scaffold00182: 44686-57757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00182: 55758-57757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 5.0kb upstream 5.0kb upstream 16072 true AmTr_v1.0_scaffold00182: 39686-55757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00182: 39686-44685 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 5.0kb downstream 5.0kb downstream 16072 true AmTr_v1.0_scaffold00182: 44686-60757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00182: 55758-60757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 10.0kb upstream 10.0kb upstream 21072 true AmTr_v1.0_scaffold00182: 34686-55757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00182: 34686-44685 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 10.0kb downstream 10.0kb downstream 21072 true AmTr_v1.0_scaffold00182: 44686-65757 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00182: 55758-65757 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain