Gene : evm_27.TU.AmTr_v1.0_scaffold00182.32 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  32
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00182.32 Secondary Identifier:  ? PAC:31574960
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00182.32 0.5kb upstream 0.5kb upstream 2637 true AmTr_v1.0_scaffold00182: 514904-517540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00182: 514904-515403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 0.5kb downstream 0.5kb downstream 2637 true AmTr_v1.0_scaffold00182: 515404-518040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00182: 517541-518040 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 1.0kb upstream 1.0kb upstream 3137 true AmTr_v1.0_scaffold00182: 514404-517540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00182: 514404-515403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 1.0kb downstream 1.0kb downstream 3137 true AmTr_v1.0_scaffold00182: 515404-518540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00182: 517541-518540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 2.0kb upstream 2.0kb upstream 4137 true AmTr_v1.0_scaffold00182: 513404-517540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00182: 513404-515403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 2.0kb downstream 2.0kb downstream 4137 true AmTr_v1.0_scaffold00182: 515404-519540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00182: 517541-519540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 5.0kb upstream 5.0kb upstream 7137 true AmTr_v1.0_scaffold00182: 510404-517540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00182: 510404-515403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 5.0kb downstream 5.0kb downstream 7137 true AmTr_v1.0_scaffold00182: 515404-522540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00182: 517541-522540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 10.0kb upstream 10.0kb upstream 12137 true AmTr_v1.0_scaffold00182: 505404-517540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00182: 505404-515403 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 10.0kb downstream 10.0kb downstream 12137 true AmTr_v1.0_scaffold00182: 515404-527540 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00182.32 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00182: 517541-527540 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain