Gene : evm_27.TU.AmTr_v1.0_scaffold00178.5 A. trichopoda v1.0
Defline:  (1 of 3) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00178.5 Secondary Identifier:  ? PAC:31567406
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00178.5 0.5kb upstream 0.5kb upstream 28723 true AmTr_v1.0_scaffold00178: 241076-269798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00178: 241076-241575 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 0.5kb downstream 0.5kb downstream 28723 true AmTr_v1.0_scaffold00178: 241576-270298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00178: 269799-270298 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 1.0kb upstream 1.0kb upstream 29223 true AmTr_v1.0_scaffold00178: 240576-269798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00178: 240576-241575 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 1.0kb downstream 1.0kb downstream 29223 true AmTr_v1.0_scaffold00178: 241576-270798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00178: 269799-270798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 2.0kb upstream 2.0kb upstream 30223 true AmTr_v1.0_scaffold00178: 239576-269798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00178: 239576-241575 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 2.0kb downstream 2.0kb downstream 30223 true AmTr_v1.0_scaffold00178: 241576-271798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00178: 269799-271798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 5.0kb upstream 5.0kb upstream 33223 true AmTr_v1.0_scaffold00178: 236576-269798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00178: 236576-241575 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 5.0kb downstream 5.0kb downstream 33223 true AmTr_v1.0_scaffold00178: 241576-274798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00178: 269799-274798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 10.0kb upstream 10.0kb upstream 38223 true AmTr_v1.0_scaffold00178: 231576-269798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00178: 231576-241575 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 10.0kb downstream 10.0kb downstream 38223 true AmTr_v1.0_scaffold00178: 241576-279798 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00178.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00178: 269799-279798 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain