Gene : evm_27.TU.AmTr_v1.0_scaffold00177.28 A. trichopoda v1.0
Defline:  (1 of 1) 3.1.3.16//3.1.3.48//3.1.3.67 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase // Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  28
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00177.28 Secondary Identifier:  ? PAC:31554937
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6368 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00177.28 0.5kb upstream 0.5kb upstream 6712 true AmTr_v1.0_scaffold00177: 507800-514511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00177: 514012-514511 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 0.5kb downstream 0.5kb downstream 6712 true AmTr_v1.0_scaffold00177: 507300-514011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00177: 507300-507799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 1.0kb upstream 1.0kb upstream 7212 true AmTr_v1.0_scaffold00177: 507800-515011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00177: 514012-515011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 1.0kb downstream 1.0kb downstream 7212 true AmTr_v1.0_scaffold00177: 506800-514011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00177: 506800-507799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 2.0kb upstream 2.0kb upstream 8212 true AmTr_v1.0_scaffold00177: 507800-516011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00177: 514012-516011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 2.0kb downstream 2.0kb downstream 8212 true AmTr_v1.0_scaffold00177: 505800-514011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00177: 505800-507799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 5.0kb upstream 5.0kb upstream 11212 true AmTr_v1.0_scaffold00177: 507800-519011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00177: 514012-519011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 5.0kb downstream 5.0kb downstream 11212 true AmTr_v1.0_scaffold00177: 502800-514011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00177: 502800-507799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 10.0kb upstream 10.0kb upstream 16212 true AmTr_v1.0_scaffold00177: 507800-524011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00177: 514012-524011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 10.0kb downstream 10.0kb downstream 16212 true AmTr_v1.0_scaffold00177: 497800-514011 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.28 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00177: 497800-507799 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048056 5273 Angiosperm View MSA
121345998 5274 Embryophyte View MSA
123380306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain