Gene : evm_27.TU.AmTr_v1.0_scaffold00177.1 A. trichopoda v1.0
Defline:  (1 of 1) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00177.1 Secondary Identifier:  ? PAC:31554947
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6124 Amborella trichopoda pathologic  
Atrichopoda PWY-841 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00177.1 0.5kb upstream 0.5kb upstream 18763 true AmTr_v1.0_scaffold00177: 5460-24222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00177: 5460-5959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 0.5kb downstream 0.5kb downstream 18763 true AmTr_v1.0_scaffold00177: 5960-24722 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00177: 24223-24722 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 1.0kb upstream 1.0kb upstream 19263 true AmTr_v1.0_scaffold00177: 4960-24222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00177: 4960-5959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 1.0kb downstream 1.0kb downstream 19263 true AmTr_v1.0_scaffold00177: 5960-25222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00177: 24223-25222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 2.0kb upstream 2.0kb upstream 20263 true AmTr_v1.0_scaffold00177: 3960-24222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00177: 3960-5959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 2.0kb downstream 2.0kb downstream 20263 true AmTr_v1.0_scaffold00177: 5960-26222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00177: 24223-26222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 5.0kb upstream 5.0kb upstream 23263 true AmTr_v1.0_scaffold00177: 960-24222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00177: 960-5959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 5.0kb downstream 5.0kb downstream 23263 true AmTr_v1.0_scaffold00177: 5960-29222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00177: 24223-29222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 10.0kb upstream 10.0kb upstream 24222 true AmTr_v1.0_scaffold00177: 1-24222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 10.0kb upstream 10.0kb upstream 5959 false AmTr_v1.0_scaffold00177: 1-5959 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 10.0kb downstream 10.0kb downstream 28263 true AmTr_v1.0_scaffold00177: 5960-34222 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00177.1 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00177: 24223-34222 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain