Gene : evm_27.TU.AmTr_v1.0_scaffold00176.13 A. trichopoda v1.0
Defline:  (1 of 2) PTHR23205 - SPLICING FACTOR 3A SUBUNIT 2 Genomic Order:  13
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00176.13 Secondary Identifier:  ? PAC:31564498
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00176.13 0.5kb upstream 0.5kb upstream 4341 true AmTr_v1.0_scaffold00176: 290959-295299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00176: 294800-295299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 0.5kb downstream 0.5kb downstream 4341 true AmTr_v1.0_scaffold00176: 290459-294799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00176: 290459-290958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 1.0kb upstream 1.0kb upstream 4841 true AmTr_v1.0_scaffold00176: 290959-295799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00176: 294800-295799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 1.0kb downstream 1.0kb downstream 4841 true AmTr_v1.0_scaffold00176: 289959-294799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00176: 289959-290958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 2.0kb upstream 2.0kb upstream 5841 true AmTr_v1.0_scaffold00176: 290959-296799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00176: 294800-296799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 2.0kb downstream 2.0kb downstream 5841 true AmTr_v1.0_scaffold00176: 288959-294799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00176: 288959-290958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 5.0kb upstream 5.0kb upstream 8841 true AmTr_v1.0_scaffold00176: 290959-299799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00176: 294800-299799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 5.0kb downstream 5.0kb downstream 8841 true AmTr_v1.0_scaffold00176: 285959-294799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00176: 285959-290958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 10.0kb upstream 10.0kb upstream 13841 true AmTr_v1.0_scaffold00176: 290959-304799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00176: 294800-304799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 10.0kb downstream 10.0kb downstream 13841 true AmTr_v1.0_scaffold00176: 280959-294799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.13 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00176: 280959-290958 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain