Gene : evm_27.TU.AmTr_v1.0_scaffold00176.30 A. trichopoda v1.0
Defline:  (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  30
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00176.30 Secondary Identifier:  ? PAC:31564496
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00176.30 0.5kb upstream 0.5kb upstream 47092 true AmTr_v1.0_scaffold00176: 565757-612848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00176: 565757-566256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 0.5kb downstream 0.5kb downstream 47092 true AmTr_v1.0_scaffold00176: 566257-613348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00176: 612849-613348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 1.0kb upstream 1.0kb upstream 47592 true AmTr_v1.0_scaffold00176: 565257-612848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00176: 565257-566256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 1.0kb downstream 1.0kb downstream 47592 true AmTr_v1.0_scaffold00176: 566257-613848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00176: 612849-613848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 2.0kb upstream 2.0kb upstream 48592 true AmTr_v1.0_scaffold00176: 564257-612848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00176: 564257-566256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 2.0kb downstream 2.0kb downstream 48592 true AmTr_v1.0_scaffold00176: 566257-614848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00176: 612849-614848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 5.0kb upstream 5.0kb upstream 51592 true AmTr_v1.0_scaffold00176: 561257-612848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00176: 561257-566256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 5.0kb downstream 5.0kb downstream 51592 true AmTr_v1.0_scaffold00176: 566257-617848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00176: 612849-617848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 10.0kb upstream 10.0kb upstream 56592 true AmTr_v1.0_scaffold00176: 556257-612848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00176: 556257-566256 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 10.0kb downstream 10.0kb downstream 56592 true AmTr_v1.0_scaffold00176: 566257-622848 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00176.30 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00176: 612849-622848 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain