Gene : evm_27.TU.AmTr_v1.0_scaffold00174.34 A. trichopoda v1.0
Defline:  (1 of 30) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  34
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00174.34 Secondary Identifier:  ? PAC:31560988
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00174.34 0.5kb upstream 0.5kb upstream 890 true AmTr_v1.0_scaffold00174: 681099-681988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00174: 681489-681988 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 0.5kb downstream 0.5kb downstream 890 true AmTr_v1.0_scaffold00174: 680599-681488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00174: 680599-681098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 1.0kb upstream 1.0kb upstream 1390 true AmTr_v1.0_scaffold00174: 681099-682488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00174: 681489-682488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 1.0kb downstream 1.0kb downstream 1390 true AmTr_v1.0_scaffold00174: 680099-681488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00174: 680099-681098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 2.0kb upstream 2.0kb upstream 2390 true AmTr_v1.0_scaffold00174: 681099-683488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00174: 681489-683488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 2.0kb downstream 2.0kb downstream 2390 true AmTr_v1.0_scaffold00174: 679099-681488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00174: 679099-681098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 5.0kb upstream 5.0kb upstream 5390 true AmTr_v1.0_scaffold00174: 681099-686488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00174: 681489-686488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 5.0kb downstream 5.0kb downstream 5390 true AmTr_v1.0_scaffold00174: 676099-681488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00174: 676099-681098 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 10.0kb upstream 10.0kb upstream 10390 true AmTr_v1.0_scaffold00174: 681099-691488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00174: 681489-691488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 10.0kb downstream 10.0kb downstream 10390 true AmTr_v1.0_scaffold00174: 671099-681488 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00174.34 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00174: 671099-681098 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain