Gene : evm_27.TU.AmTr_v1.0_scaffold00173.5 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12707 - PINN Genomic Order:  5
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00173.5 Secondary Identifier:  ? PAC:31569887
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00173.5 0.5kb upstream 0.5kb upstream 39070 true AmTr_v1.0_scaffold00173: 267282-306351 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00173: 305852-306351 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 0.5kb downstream 0.5kb downstream 39070 true AmTr_v1.0_scaffold00173: 266782-305851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00173: 266782-267281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 1.0kb upstream 1.0kb upstream 39570 true AmTr_v1.0_scaffold00173: 267282-306851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00173: 305852-306851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 1.0kb downstream 1.0kb downstream 39570 true AmTr_v1.0_scaffold00173: 266282-305851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00173: 266282-267281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 2.0kb upstream 2.0kb upstream 40570 true AmTr_v1.0_scaffold00173: 267282-307851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00173: 305852-307851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 2.0kb downstream 2.0kb downstream 40570 true AmTr_v1.0_scaffold00173: 265282-305851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00173: 265282-267281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 5.0kb upstream 5.0kb upstream 43570 true AmTr_v1.0_scaffold00173: 267282-310851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00173: 305852-310851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 5.0kb downstream 5.0kb downstream 43570 true AmTr_v1.0_scaffold00173: 262282-305851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00173: 262282-267281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 10.0kb upstream 10.0kb upstream 48570 true AmTr_v1.0_scaffold00173: 267282-315851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00173: 305852-315851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 10.0kb downstream 10.0kb downstream 48570 true AmTr_v1.0_scaffold00173: 257282-305851 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00173.5 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00173: 257282-267281 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046264 5273 Angiosperm View MSA
121351481 5274 Embryophyte View MSA
123426416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain