Gene : evm_27.TU.AmTr_v1.0_scaffold00171.39 A. trichopoda v1.0
Defline:  (1 of 12) PF01585 - G-patch domain (G-patch) Genomic Order:  39
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00171.39 Secondary Identifier:  ? PAC:31568474
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00171.39 0.5kb upstream 0.5kb upstream 4241 true AmTr_v1.0_scaffold00171: 549130-553370 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00171: 552871-553370 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 0.5kb downstream 0.5kb downstream 4241 true AmTr_v1.0_scaffold00171: 548630-552870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00171: 548630-549129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 1.0kb upstream 1.0kb upstream 4741 true AmTr_v1.0_scaffold00171: 549130-553870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00171: 552871-553870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 1.0kb downstream 1.0kb downstream 4741 true AmTr_v1.0_scaffold00171: 548130-552870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00171: 548130-549129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 2.0kb upstream 2.0kb upstream 5741 true AmTr_v1.0_scaffold00171: 549130-554870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00171: 552871-554870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 2.0kb downstream 2.0kb downstream 5741 true AmTr_v1.0_scaffold00171: 547130-552870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00171: 547130-549129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 5.0kb upstream 5.0kb upstream 8741 true AmTr_v1.0_scaffold00171: 549130-557870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00171: 552871-557870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 5.0kb downstream 5.0kb downstream 8741 true AmTr_v1.0_scaffold00171: 544130-552870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00171: 544130-549129 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 10.0kb upstream 10.0kb upstream 13741 true AmTr_v1.0_scaffold00171: 549130-562870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00171: 552871-562870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 10.0kb downstream 10.0kb downstream 13741 true AmTr_v1.0_scaffold00171: 539130-552870 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.39 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00171: 539130-549129 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044236 5273 Angiosperm View MSA
121347132 5274 Embryophyte View MSA
123425168 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain