Gene : evm_27.TU.AmTr_v1.0_scaffold00171.33 A. trichopoda v1.0

Defline:  (1 of 1) PTHR22911//PTHR22911:SF60 - ACYL-MALONYL CONDENSING ENZYME-RELATED Genomic Order:  33
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00171.33 Secondary Identifier:  ? PAC:31568465

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00171.33 0.5kb upstream 0.5kb upstream 5773 true AmTr_v1.0_scaffold00171: 496390-502162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00171: 496390-496889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 0.5kb downstream 0.5kb downstream 5773 true AmTr_v1.0_scaffold00171: 496890-502662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00171: 502163-502662 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 1.0kb upstream 1.0kb upstream 6273 true AmTr_v1.0_scaffold00171: 495890-502162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00171: 495890-496889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 1.0kb downstream 1.0kb downstream 6273 true AmTr_v1.0_scaffold00171: 496890-503162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00171: 502163-503162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 2.0kb upstream 2.0kb upstream 7273 true AmTr_v1.0_scaffold00171: 494890-502162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00171: 494890-496889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 2.0kb downstream 2.0kb downstream 7273 true AmTr_v1.0_scaffold00171: 496890-504162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00171: 502163-504162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 5.0kb upstream 5.0kb upstream 10273 true AmTr_v1.0_scaffold00171: 491890-502162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00171: 491890-496889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 5.0kb downstream 5.0kb downstream 10273 true AmTr_v1.0_scaffold00171: 496890-507162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00171: 502163-507162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 10.0kb upstream 10.0kb upstream 15273 true AmTr_v1.0_scaffold00171: 486890-502162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00171: 486890-496889 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 10.0kb downstream 10.0kb downstream 15273 true AmTr_v1.0_scaffold00171: 496890-512162 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00171.33 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00171: 502163-512162 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040883 5273 Angiosperm View MSA
121351564 5274 Embryophyte View MSA
123424417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain