Gene : evm_27.TU.AmTr_v1.0_scaffold00169.13 A. trichopoda v1.0
Defline:  (1 of 37) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  13
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00169.13 Secondary Identifier:  ? PAC:31575171
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00169.13 0.5kb upstream 0.5kb upstream 3408 true AmTr_v1.0_scaffold00169: 164766-168173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00169: 167674-168173 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 0.5kb downstream 0.5kb downstream 3408 true AmTr_v1.0_scaffold00169: 164266-167673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00169: 164266-164765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 1.0kb upstream 1.0kb upstream 3908 true AmTr_v1.0_scaffold00169: 164766-168673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00169: 167674-168673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 1.0kb downstream 1.0kb downstream 3908 true AmTr_v1.0_scaffold00169: 163766-167673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00169: 163766-164765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 2.0kb upstream 2.0kb upstream 4908 true AmTr_v1.0_scaffold00169: 164766-169673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00169: 167674-169673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 2.0kb downstream 2.0kb downstream 4908 true AmTr_v1.0_scaffold00169: 162766-167673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00169: 162766-164765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 5.0kb upstream 5.0kb upstream 7908 true AmTr_v1.0_scaffold00169: 164766-172673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00169: 167674-172673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 5.0kb downstream 5.0kb downstream 7908 true AmTr_v1.0_scaffold00169: 159766-167673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00169: 159766-164765 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 10.0kb upstream 10.0kb upstream 12908 true AmTr_v1.0_scaffold00169: 164766-177673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00169: 167674-177673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 10.0kb downstream 10.0kb downstream 12908 true AmTr_v1.0_scaffold00169: 154766-167673 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00169.13 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00169: 154766-164765 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122052127 5273 Angiosperm View MSA
121350373 5274 Embryophyte View MSA
123381702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain